BioBox Documentation
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Running Bioinformatic Workflows
Getting Started
Setting Up your Library + Uploading Data
Use Cases
BioBank
Organization Management
Account Management
Library Set Up and Data Upload
Library Setup and Data Upload
Library Security, Settings and Management
Series Reports
Guided Analysis
Visualizing your Data
Getting Started with Visualizations
Scatter Plots
Heatmaps
Cirocs and Lollipop Plots
Genome Browser
Bar and Box Plots
Exploring your Insights
Searching the Knowledge Engine
Data Processing Pipelines
Bulk RNAseq
Running Bioinformatic Workflows
Configuring and Launching Pipelines
Post Data Processing and Troubleshooting
FAQs
Releases
Privacy and Security
Data
FAQ
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BioBox Documentation
Running Bioinformatic Workflows
Getting Started
Setting Up your Library + Uploading Data
Use Cases
BioBank
Organization Management
Account Management
Library Set Up and Data Upload
Library Setup and Data Upload
Library Security, Settings and Management
Series Reports
Guided Analysis
Visualizing your Data
Getting Started with Visualizations
Scatter Plots
Heatmaps
Cirocs and Lollipop Plots
Genome Browser
Bar and Box Plots
Exploring your Insights
Searching the Knowledge Engine
Data Processing Pipelines
Bulk RNAseq
Running Bioinformatic Workflows
Configuring and Launching Pipelines
Post Data Processing and Troubleshooting
FAQs
Releases
Privacy and Security
Data
FAQ
Running Bioinformatic Workflows
Customizing and running bioinformatic workflows to process your data.
Configuring and Launching Pipelines
How to Create a Gene Count Matrix
RNAseq Prebuilt Pipeline
Configuring and Launching Pipelines from the Pipeline Design Studio
How to explore and run pipelines with publicly available data
Post Data Processing and Troubleshooting
How to terminate a pipeline that is in progress
A comprehensive overview of the pipeline results page
Where to find a summary of the workflows and parameters used to process your data
Pipeline Error Reports
FAQs
When processing bulk RNA-seq data, is it possible to do a custom normalization?
How is the counting program dealing with multi-mapping?
What program do we use to assess gene counts?
Which annotation file do we use in STAR?
Do we have the ability to customize strandedness in STAR?
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