How to Create a Lollipop Plot

How to visualize your SNVs in a lollipop plot

HubSpot Video


  1. Create a project and create an "Analysis" within your project. Within the Analysis select "Visualization". 
  2. Select the "VCF" tab and select the lollipop icon next to the file you would like to work with. 
  3. Navigate to the "Plot" tab and select "lollipop". Use the right hand plot configuration panel to  panel to select a target gene from your file.
    1. Series - select your target gene. Swap between Genomic and cDNA view, toggle protein domains off and on. Hover over over the variants to obtain additional information pertaining to the variant.  
    2. Grid- Update plot title. 
  4. Use the cloud icon located in the top right hand corner of the plot to export it to your desktop.